STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCD5Stearoyl-CoA desaturase 5; Belongs to the fatty acid desaturase type 1 family. (333 aa)    
Predicted Functional Partners:
ITIH4
Uncharacterized protein.
      
 0.637
FADS3
Fatty acid desaturase 3.
   
 
 0.623
GPAT4
Glycerol-3-phosphate acyltransferase 4.
    
 0.613
PCGF3
Polycomb group ring finger 3.
    
 
 0.599
GPAT3
Glycerol-3-phosphate acyltransferase 3.
  
 
 0.598
SREBF2
Sterol regulatory element binding transcription factor 2.
   
 
 0.566
ACACA
Acetyl-CoA carboxylase alpha.
   
  
 0.525
IPCEF1
Interaction protein for cytohesin exchange factors 1.
      
 0.525
CYB5R4
Cytochrome b5 reductase 4.
   
 
 0.507
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.497
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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