STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY4MINDY lysine 48 deubiquitinase 4. (830 aa)    
Predicted Functional Partners:
MINDY1
MINDY lysine 48 deubiquitinase 1.
      
 0.761
TSPYL5
TSPY like 5; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.690
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.651
SPECC1L
Calponin-homology (CH) domain-containing protein.
      
 0.570
GIT2
GIT ArfGAP 2.
      
 0.546
LRBA
LPS responsive beige-like anchor protein.
      
 0.508
AQP11
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
   
  
 0.502
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.