STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL6Peptidylprolyl isomerase like 6. (311 aa)    
Predicted Functional Partners:
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.737
ZNF215
Zinc finger protein 215.
    
 
 0.711
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.657
MYL4
Myosin light chain 4.
   
 
 0.651
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
    
 0.612
SNW1
SNW domain containing 1.
    
 0.588
PRPF19
Pre-mRNA processing factor 19.
    
 0.588
XAB2
XPA binding protein 2.
   
 0.584
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.547
NUP155
Nucleoporin 155.
   
 0.543
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.