STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF13Ring finger protein 13. (372 aa)    
Predicted Functional Partners:
DCAF8
DDB1 and CUL4 associated factor 8.
      
 0.699
CGRRF1
Cell growth regulator with ring finger domain 1.
   
 
 0.665
SDF2
Stromal cell derived factor 2.
 
 
    0.633
RNFT1
Uncharacterized protein.
      
 0.629
G1SK22_RABIT
Ubiquitin-like domain-containing protein.
    
  0.587
G1TZL0_RABIT
Ubiquitin-like domain-containing protein.
    
  0.587
UBE2D2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.585
RNF170
Ring finger protein 170.
      
 0.577
ZGPAT
G-patch domain-containing protein.
   
  
 0.536
ENSOCUP00000044498
Ribosomal_L40e domain-containing protein.
    
  0.535
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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