Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCNH | DDX11 | ENSOCUP00000004022 | ENSOCUP00000005270 | Cyclin H; Belongs to the cyclin family. | Helicase ATP-binding domain-containing protein. | 0.904 |
CCNH | ERCC3 | ENSOCUP00000004022 | ENSOCUP00000001942 | Cyclin H; Belongs to the cyclin family. | ERCC excision repair 3, TFIIH core complex helicase subunit. | 0.996 |
CCNH | GTF2E1 | ENSOCUP00000004022 | ENSOCUP00000002414 | Cyclin H; Belongs to the cyclin family. | General transcription factor IIE subunit 1. | 0.996 |
CCNH | GTF2H3 | ENSOCUP00000004022 | ENSOCUP00000003012 | Cyclin H; Belongs to the cyclin family. | General transcription factor IIH subunit 3. | 0.999 |
CCNH | GTF2H4 | ENSOCUP00000004022 | ENSOCUP00000038698 | Cyclin H; Belongs to the cyclin family. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.989 |
CCNH | LOC100338745 | ENSOCUP00000004022 | ENSOCUP00000013446 | Cyclin H; Belongs to the cyclin family. | VWFA domain-containing protein. | 0.988 |
CCNH | MNAT1 | ENSOCUP00000004022 | ENSOCUP00000012268 | Cyclin H; Belongs to the cyclin family. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.999 |
DDX11 | CCNH | ENSOCUP00000005270 | ENSOCUP00000004022 | Helicase ATP-binding domain-containing protein. | Cyclin H; Belongs to the cyclin family. | 0.904 |
DDX11 | ERCC3 | ENSOCUP00000005270 | ENSOCUP00000001942 | Helicase ATP-binding domain-containing protein. | ERCC excision repair 3, TFIIH core complex helicase subunit. | 0.928 |
DDX11 | GTF2E1 | ENSOCUP00000005270 | ENSOCUP00000002414 | Helicase ATP-binding domain-containing protein. | General transcription factor IIE subunit 1. | 0.906 |
DDX11 | GTF2H3 | ENSOCUP00000005270 | ENSOCUP00000003012 | Helicase ATP-binding domain-containing protein. | General transcription factor IIH subunit 3. | 0.916 |
DDX11 | GTF2H4 | ENSOCUP00000005270 | ENSOCUP00000038698 | Helicase ATP-binding domain-containing protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.913 |
DDX11 | LOC100338745 | ENSOCUP00000005270 | ENSOCUP00000013446 | Helicase ATP-binding domain-containing protein. | VWFA domain-containing protein. | 0.918 |
DDX11 | MNAT1 | ENSOCUP00000005270 | ENSOCUP00000012268 | Helicase ATP-binding domain-containing protein. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.913 |
DDX11 | SLF1 | ENSOCUP00000005270 | ENSOCUP00000003718 | Helicase ATP-binding domain-containing protein. | SMC5-SMC6 complex localization factor 1. | 0.896 |
DDX11 | SYMPK | ENSOCUP00000005270 | ENSOCUP00000004785 | Helicase ATP-binding domain-containing protein. | Symplekin. | 0.947 |
DDX11 | WRN | ENSOCUP00000005270 | ENSOCUP00000010872 | Helicase ATP-binding domain-containing protein. | WRN RecQ like helicase. | 0.983 |
ERCC3 | CCNH | ENSOCUP00000001942 | ENSOCUP00000004022 | ERCC excision repair 3, TFIIH core complex helicase subunit. | Cyclin H; Belongs to the cyclin family. | 0.996 |
ERCC3 | DDX11 | ENSOCUP00000001942 | ENSOCUP00000005270 | ERCC excision repair 3, TFIIH core complex helicase subunit. | Helicase ATP-binding domain-containing protein. | 0.928 |
ERCC3 | GTF2E1 | ENSOCUP00000001942 | ENSOCUP00000002414 | ERCC excision repair 3, TFIIH core complex helicase subunit. | General transcription factor IIE subunit 1. | 0.998 |
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