STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM47Tripartite motif containing 47. (646 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 0.713
TRIM42
Tripartite motif containing 42.
      
 0.650
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.596
TRIM37
Tripartite motif containing 37.
    
 
 0.596
EAF2
ELL associated factor 2.
      
 0.595
IFIH1
Interferon induced with helicase C domain 1.
   
 0.551
TRIM59
Uncharacterized protein.
      
 0.545
TRIM66
Tripartite motif containing 66.
      
 0.538
TRIM69
Tripartite motif containing 69.
      
 0.534
ARSJ
Sulfatase domain-containing protein.
      
 0.527
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.