Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FUBP3Far upstream element binding protein 3. (451 aa)    
Predicted Functional Partners:
QKI
QKI, KH domain containing RNA binding.
   
 
 0.690
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.689
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
   
 
 0.662
EXOSC2
Exosome component 2.
   
 0.583
KHDRBS3
KH RNA binding domain containing, signal transduction associated 3.
   
 
 0.557
PTBP3
Polypyrimidine tract binding protein 3.
   
 
 0.557
PUM1
Pumilio RNA binding family member 1.
   
 
 0.489
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.482
RBM22
RNA binding motif protein 22.
   
  
 0.467
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.455
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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