STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD4Sushi domain containing 4. (490 aa)    
Predicted Functional Partners:
HAL
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
  
 0.593
ZNF407
Zinc finger protein 407.
   
  
 0.590
TOX3
TOX high mobility group box family member 3.
   
  
 0.551
CDKN3
Cyclin dependent kinase inhibitor 3.
      
 0.550
PHF11
PHD finger protein 11; Belongs to the cullin family.
      
 0.549
FHAD1
Forkhead associated phosphopeptide binding domain 1.
   
  
 0.548
S100A5
Protein S100; Belongs to the S-100 family.
   
  
 0.545
CSMD1
Uncharacterized protein.
      
 0.544
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.535
USH1C
USH1 protein network component harmonin.
   
  
 0.526
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.