Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FKBPLFKBP prolyl isomerase like. (349 aa)    
Predicted Functional Partners:
CCDC189
Uncharacterized protein.
   
    0.994
ANKRD49
Ankyrin repeat domain 49.
    
 0.956
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
 0.837
GTSE1
GTSE1_N domain-containing protein.
     
 0.779
CSNK1D
Casein kinase I isoform delta.
    
  0.759
ZSWIM7
Zinc finger SWIM-type containing 7.
   
  
 0.744
AK9
Uncharacterized protein.
    
 0.722
FAM107A
Family with sequence similarity 107 member A.
    
   0.714
MCMDC2
Minichromosome maintenance domain containing 2.
   
 
 0.704
FBXO43
F-box protein 43.
    
 0.699
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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