CSMD3 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

CSMD3

CUB and Sushi multiple domains 3. (3683 aa)

Predicted Functional Partners:

LRP1B

0.707

HYDIN

0.656

NAV3

0.604

TTN

0.602

FAT3

0.596

PKHD1L1

0.590

USH2A

0.574

ACTL9

0.573

SYNE1

0.571

PIK3CA

0.546

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL9	CSMD3	ENSOCUP00000026992	ENSOCUP00000005413	Actin like 9; Belongs to the actin family.	CUB and Sushi multiple domains 3.	0.573
CSMD3	ACTL9	ENSOCUP00000005413	ENSOCUP00000026992	CUB and Sushi multiple domains 3.	Actin like 9; Belongs to the actin family.	0.573
CSMD3	FAT3	ENSOCUP00000005413	ENSOCUP00000038913	CUB and Sushi multiple domains 3.	FAT atypical cadherin 3.	0.596
CSMD3	HYDIN	ENSOCUP00000005413	ENSOCUP00000009580	CUB and Sushi multiple domains 3.	HYDIN axonemal central pair apparatus protein.	0.656
CSMD3	LRP1B	ENSOCUP00000005413	ENSOCUP00000014803	CUB and Sushi multiple domains 3.	LDL receptor related protein 1B.	0.707
CSMD3	NAV3	ENSOCUP00000005413	ENSOCUP00000038889	CUB and Sushi multiple domains 3.	Neuron navigator 3.	0.604
CSMD3	PIK3CA	ENSOCUP00000005413	ENSOCUP00000026298	CUB and Sushi multiple domains 3.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.546
CSMD3	PKHD1L1	ENSOCUP00000005413	ENSOCUP00000020692	CUB and Sushi multiple domains 3.	PKHD1 like 1.	0.590
CSMD3	SYNE1	ENSOCUP00000005413	ENSOCUP00000027005	CUB and Sushi multiple domains 3.	Spectrin repeat containing nuclear envelope protein 1.	0.571
CSMD3	TTN	ENSOCUP00000005413	ENSOCUP00000039102	CUB and Sushi multiple domains 3.	Uncharacterized protein.	0.602
CSMD3	USH2A	ENSOCUP00000005413	ENSOCUP00000012684	CUB and Sushi multiple domains 3.	Uncharacterized protein.	0.574
FAT3	CSMD3	ENSOCUP00000038913	ENSOCUP00000005413	FAT atypical cadherin 3.	CUB and Sushi multiple domains 3.	0.596
HYDIN	CSMD3	ENSOCUP00000009580	ENSOCUP00000005413	HYDIN axonemal central pair apparatus protein.	CUB and Sushi multiple domains 3.	0.656
LRP1B	CSMD3	ENSOCUP00000014803	ENSOCUP00000005413	LDL receptor related protein 1B.	CUB and Sushi multiple domains 3.	0.707
LRP1B	PIK3CA	ENSOCUP00000014803	ENSOCUP00000026298	LDL receptor related protein 1B.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.535
LRP1B	USH2A	ENSOCUP00000014803	ENSOCUP00000012684	LDL receptor related protein 1B.	Uncharacterized protein.	0.550
NAV3	CSMD3	ENSOCUP00000038889	ENSOCUP00000005413	Neuron navigator 3.	CUB and Sushi multiple domains 3.	0.604
PIK3CA	CSMD3	ENSOCUP00000026298	ENSOCUP00000005413	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	CUB and Sushi multiple domains 3.	0.546
PIK3CA	LRP1B	ENSOCUP00000026298	ENSOCUP00000014803	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	LDL receptor related protein 1B.	0.535
PKHD1L1	CSMD3	ENSOCUP00000020692	ENSOCUP00000005413	PKHD1 like 1.	CUB and Sushi multiple domains 3.	0.590