Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ARVCFARVCF delta catenin family member. (926 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.952
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.926
CDH5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.897
JUP
Junction plakoglobin.
   
 0.893
ZBTB33
Zinc finger and BTB domain containing 33.
    
 
 0.881
CDH11
Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.869
CTNNA2
Catenin alpha 2.
   
 0.847
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.832
CDH3
Cadherin 3; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.832
PTPRJ
Protein tyrosine phosphatase receptor type J.
   
 0.823
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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