STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFFLRing finger and FYVE like domain containing E3 ubiquitin protein ligase. (361 aa)    
Predicted Functional Partners:
RNF207
RING finger protein 207; Plays a role in cardiac repolarization possibly by stabilizing membrane expression of the potassium channel KCNH2/HERG, or by assisting its synthesis, folding or export from the endoplasmic reticulum, in a heat shock protein-dependent manner.
      
 0.803
DNAJB12
DnaJ heat shock protein family (Hsp40) member B12.
      
 0.717
MYRF
Myelin regulatory factor.
      
 0.707
DNAJB14
DnaJ heat shock protein family (Hsp40) member B14.
      
 0.663
PRRG1
Proline rich and Gla domain 1.
      
 0.613
NIPAL4
NIPA like domain containing 4.
      
 0.525
UBE2D2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.522
LITAF
Lipopolysaccharide induced TNF factor.
   
  
 0.498
TNP1
Transition protein 1.
      
 0.493
MYRFL
Myelin regulatory factor like.
      
 0.490
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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