Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDC4Enhancer of mRNA decapping 4. (1404 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
    
 0.999
DCP1A
Decapping mRNA 1A.
    
 0.999
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.998
EDC3
Uncharacterized protein.
   
 0.998
XRN1
5'-3' exoribonuclease 1.
    
 
 0.988
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.988
DCP1B
Decapping mRNA 1B.
    
 0.988
ENSOCUP00000032474
LSM14 domain-containing protein.
   
 0.968
LSM14A
Uncharacterized protein.
    
 
 0.925
PATL2
PAT1 homolog 2.
    
 0.829
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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