STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSKH1Protein serine kinase H1; Belongs to the protein kinase superfamily. (424 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
 
 
 
 0.870
TTN
Uncharacterized protein.
 
  
 
 0.727
ENSOCUP00000030887
Uncharacterized protein.
 
  
 
 0.718
MPP1
Palmitoylated membrane protein 1 (Predicted); Belongs to the MAGUK family.
 
 
 0.610
EFCAB3
EF-hand calcium binding domain 3.
   
 0.506
CALM1
Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels, aquaporins and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Together with CCP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis (By similarity).
   
 0.506
CALML5
Calmodulin like 5.
   
 0.506
EFCAB13
EF-hand calcium binding domain 13.
   
 0.506
ENSOCUP00000041847
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.506
CALM2
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.506
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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