Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAP47Synaptosome associated protein 47. (420 aa)    
Predicted Functional Partners:
STX7
Syntaxin 7; Belongs to the syntaxin family.
    
 0.981
STX18
Syntaxin 18.
    
 0.969
STX4
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.940
VAMP4
Vesicle associated membrane protein 4.
   
 0.934
STX3
Syntaxin 3; Belongs to the syntaxin family.
   
 0.920
STX3-2
SynN domain-containing protein.
   
 0.919
VAMP7
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.916
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.904
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.903
STX17
Syntaxin 17; Belongs to the syntaxin family.
    
 0.901
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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