STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM180BFamily with sequence similarity 180 member B. (184 aa)    
Predicted Functional Partners:
MGAT4C
MGAT4 family member C.
      
 0.573
VIT
Vitrin.
      
 0.567
MATN4
Matrilin 4.
      
 0.552
C1QTNF4
C1q and TNF related 4.
      
 0.547
PAMR1
Peptidase domain containing associated with muscle regeneration 1; Belongs to the peptidase S1 family.
   
  
 0.543
MICAL2
Microtubule associated monooxygenase, calponin and LIM domain containing 2.
   
  
 0.477
PPP1R1A
Protein phosphatase 1 regulatory subunit 1A; Inhibitor of protein-phosphatase 1. This protein may be important in hormonal control of glycogen metabolism. Hormones that elevate intracellular cAMP increase I-1 activity in many tissues. I-1 activation may impose cAMP control over proteins that are not directly phosphorylated by PKA. Following a rise in intracellular calcium, I-1 is inactivated by calcineurin (or PP2B). Does not inhibit type-2 phosphatases.
      
 0.466
PNMT
Phenylethanolamine N-methyltransferase.
      
 0.457
MMP27
Matrix metallopeptidase 27.
      
 0.455
CLUL1
Clusterin; Belongs to the clusterin family.
  
     0.451
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.