Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC100346099IF rod domain-containing protein; Belongs to the intermediate filament family. (489 aa)    
Predicted Functional Partners:
DSG4
Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.712
DSG1
Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
     
 0.678
PRR27
Uncharacterized protein.
      
 0.673
KRT39
Keratin 39; Belongs to the intermediate filament family.
  
0.619
DSG3
Uncharacterized protein.
     
 0.543
DSG2
Desmoglein 2.
     
 0.543
ZG16B
Jacalin-type lectin domain-containing protein.
      
 0.511
KRT26
Keratin 26; Belongs to the intermediate filament family.
  
0.491
NBR1
NBR1 autophagy cargo receptor.
   
  0.487
KRT25
Keratin 25; Belongs to the intermediate filament family.
  
0.479
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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