STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR16Proline rich 16. (304 aa)    
Predicted Functional Partners:
TMEM154
Transmembrane protein 154.
      
 0.727
DAW1
WD_REPEATS_REGION domain-containing protein.
      
 0.650
CCDC18
Coiled-coil domain containing 18.
      
 0.649
TMEM171
Transmembrane protein 171.
      
 0.613
ZBED2
Zinc finger BED-type containing 2.
      
 0.593
RHOV
Ras homolog family member V.
      
 0.583
CDX4
Caudal type homeobox 4.
      
 0.581
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
      
 0.576
DEPDC1B
DEP domain containing 1B.
      
 0.569
COBL
Cordon-bleu WH2 repeat protein.
      
 0.563
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.