Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C9orf72C9orf72-SMCR8 complex subunit. (481 aa)    
Predicted Functional Partners:
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.998
WDR41
WD_REPEATS_REGION domain-containing protein.
    
 0.994
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
  
 
 0.985
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.982
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.979
RAB39B
RAB39B, member RAS oncogene family (Predicted).
    
 0.978
ATG101
Autophagy related 101.
    
 0.967
ULK2
Unc-51 like autophagy activating kinase 2.
    
 0.946
TARDBP
TAR DNA binding protein.
    
 
 0.933
ENSOCUP00000035029
Uncharacterized protein.
    
 0.928
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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