STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf72C9orf72-SMCR8 complex subunit. (481 aa)    
Predicted Functional Partners:
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.997
WDR41
WD_REPEATS_REGION domain-containing protein.
    
 0.997
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.964
ATG101
Autophagy related 101.
    
 0.962
RAB39B
RAB39B, member RAS oncogene family (Predicted).
    
 0.958
RAB1A
RAB1A, member RAS oncogene family.
    
 0.955
TARDBP
TAR DNA binding protein.
      
 0.942
ULK2
Unc-51 like autophagy activating kinase 2.
    
 0.942
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.939
FUS
FUS RNA binding protein.
    
 
 0.907
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.