STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX30DExH-box helicase 30. (1222 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
  0.973
FASTKD3
FAST kinase domains 3.
   
 
 0.791
ITSN1
Intersectin 1.
    
  0.780
FASTKD2
RAP domain-containing protein.
   
  
 0.771
PDCD11
Programmed cell death 11.
  
 0.762
DDX28
DEAD-box helicase 28.
   
 0.760
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
  
 0.738
SSBP1
Single-stranded DNA-binding protein, mitochondrial; Binds preferentially and cooperatively to pyrimidine rich single-stranded DNA (ss-DNA). In vitro, required to maintain the copy number of mitochondrial DNA (mtDNA) and plays crucial roles during mtDNA replication that stimulate activity of the replisome components POLG and TWNK at the replication fork. Promotes the activity of the gamma complex polymerase POLG, largely by organizing the template DNA and eliminating secondary structures to favor ss-DNA conformations that facilitate POLG activity. In addition it is able to promote the 5 [...]
    
 
 0.731
PTCD3
Uncharacterized protein.
   
  
 0.727
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 0.724
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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