STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARX1BARX homeobox 1. (311 aa)    
Predicted Functional Partners:
TBX22
T-box transcription factor 22.
   
 
 0.723
OSR2
Odd-skipped related transciption factor 2.
    
 0.654
PAX9
Paired box 9.
   
  
 0.606
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.595
BMP4
Bone morphogenetic protein 4; Induces cartilage and bone formation. Acts in concert with PTHLH/PTHRP to stimulate ductal outgrowth during embryonic mammary development and to inhibit hair follicle induction (By similarity).
      
 0.581
FOXF1
Forkhead box F1.
    
 0.575
SFRP2
Secreted frizzled related protein 2.
   
 
 0.575
HAND2
BHLH domain-containing protein.
      
 0.561
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
   
  
 0.548
NKX3-2
NK3 homeobox 2.
   
  
0.524
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.