Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G1SR88_RABITIg-like domain-containing protein; Belongs to the MHC class I family. (264 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
0.822
RPA2
Replication protein A2.
   
 0.806
G1T551_RABIT
Ig-like domain-containing protein; Belongs to the MHC class I family.
  
0.747
CD8A
Ig-like domain-containing protein.
    
 0.696
CALR3
Calreticulin.
    
 0.667
TAPBP
TAP binding protein.
   
 0.667
CALR
Calreticulin.
    
 0.656
HLA-DRA
Integral membrane protein; Belongs to the MHC class II family.
   
 
0.589
LOC100343144
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
 
0.589
TAPBPL
TAP binding protein like.
  
 
  0.576
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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