STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP5Secretory carrier-associated membrane protein. (301 aa)    
Predicted Functional Partners:
KIAA0408
KIAA0408.
      
 0.696
ITSN1
Intersectin 1.
   
 
 0.601
TMEM230
Uncharacterized protein.
      
 0.558
ZNF84
Zinc finger protein 84.
      
 0.549
CLK3
CDC like kinase 3.
 
    
 0.520
SV2A
Synaptic vesicle glycoprotein 2A.
   
  
 0.481
ZBED6
Zinc finger BED-type containing 6.
      
 0.463
STX3
Syntaxin 3; Belongs to the syntaxin family.
   
 
 0.453
ATP6V1G2
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
  
 0.451
CPNE6
Copine 6.
      
 0.449
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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