Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A4GALTAlpha 1,4-galactosyltransferase (P blood group). (348 aa)    
Predicted Functional Partners:
B4GALT6
Beta-1,4-galactosyltransferase 6.
   
 
 0.967
B4GALT5
Beta-1,4-galactosyltransferase 5.
   
 
 0.959
B4GALT4
Beta-1,4-galactosyltransferase 4.
   
 
 0.921
ARSA
Arylsulfatase A.
     
 0.907
A3GALT2
Alpha 1,3-galactosyltransferase 2.
     
 0.888
B3GALT1
Hexosyltransferase.
   
 
 0.888
B4GALT3
Beta-1,4-galactosyltransferase 3.
   
 
 0.876
B4GALT2
Beta-1,4-galactosyltransferase 2.
   
 
 0.876
HEXA
Beta-hexosaminidase.
   
 
 0.865
HEXB
Beta-hexosaminidase.
   
 
 0.860
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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