STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF3Serine and arginine rich splicing factor 3. (164 aa)    
Predicted Functional Partners:
SRSF7
CCHC-type domain-containing protein.
   
 0.993
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.989
TRA2B
Transformer 2 beta homolog.
   
 0.987
SLU7
SLU7 homolog, splicing factor.
    
 0.974
TRA2A
Transformer 2 alpha homolog.
   
 0.969
PABPN1
RRM domain-containing protein.
   
 0.966
SRSF6
Serine/arginine-rich-splicing factor 6.
   
 0.963
SRPK1
SRSF protein kinase 1.
    
 0.963
DHX38
DEAH-box helicase 38.
   
 0.942
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.936
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.