NTAN1 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

NTAN1

N-terminal asparagine amidase. (310 aa)

Predicted Functional Partners:

ATE1

0.815

RRN3

0.739

PDXDC1

0.722

UBR1

0.718

UBR2

0.683

CCDC15

0.610

UBR4

0.604

CHST4

0.560

TMEM82

0.556

GSTT4

0.555

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATE1	NTAN1	ENSOCUP00000036887	ENSOCUP00000005789	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	N-terminal asparagine amidase.	0.815
ATE1	UBR1	ENSOCUP00000036887	ENSOCUP00000010631	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.859
ATE1	UBR2	ENSOCUP00000036887	ENSOCUP00000020259	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.768
ATE1	UBR4	ENSOCUP00000036887	ENSOCUP00000000234	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	Ubiquitin protein ligase E3 component n-recognin 4.	0.733
CCDC15	NTAN1	ENSOCUP00000047339	ENSOCUP00000005789	Coiled-coil domain containing 15.	N-terminal asparagine amidase.	0.610
CHST4	NTAN1	ENSOCUP00000008571	ENSOCUP00000005789	Sulfotransferase; Belongs to the sulfotransferase 1 family.	N-terminal asparagine amidase.	0.560
GSTT4	NTAN1	ENSOCUP00000004384	ENSOCUP00000005789	Glutathione S-transferase theta 4; Belongs to the GST superfamily.	N-terminal asparagine amidase.	0.555
NTAN1	ATE1	ENSOCUP00000005789	ENSOCUP00000036887	N-terminal asparagine amidase.	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	0.815
NTAN1	CCDC15	ENSOCUP00000005789	ENSOCUP00000047339	N-terminal asparagine amidase.	Coiled-coil domain containing 15.	0.610
NTAN1	CHST4	ENSOCUP00000005789	ENSOCUP00000008571	N-terminal asparagine amidase.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.560
NTAN1	GSTT4	ENSOCUP00000005789	ENSOCUP00000004384	N-terminal asparagine amidase.	Glutathione S-transferase theta 4; Belongs to the GST superfamily.	0.555
NTAN1	PDXDC1	ENSOCUP00000005789	ENSOCUP00000046218	N-terminal asparagine amidase.	Pyridoxal dependent decarboxylase domain containing 1.	0.722
NTAN1	RRN3	ENSOCUP00000005789	ENSOCUP00000005795	N-terminal asparagine amidase.	Uncharacterized protein.	0.739
NTAN1	TMEM82	ENSOCUP00000005789	ENSOCUP00000003963	N-terminal asparagine amidase.	Transmembrane protein 82.	0.556
NTAN1	UBR1	ENSOCUP00000005789	ENSOCUP00000010631	N-terminal asparagine amidase.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.718
NTAN1	UBR2	ENSOCUP00000005789	ENSOCUP00000020259	N-terminal asparagine amidase.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.683
NTAN1	UBR4	ENSOCUP00000005789	ENSOCUP00000000234	N-terminal asparagine amidase.	Ubiquitin protein ligase E3 component n-recognin 4.	0.604
PDXDC1	NTAN1	ENSOCUP00000046218	ENSOCUP00000005789	Pyridoxal dependent decarboxylase domain containing 1.	N-terminal asparagine amidase.	0.722
PDXDC1	RRN3	ENSOCUP00000046218	ENSOCUP00000005795	Pyridoxal dependent decarboxylase domain containing 1.	Uncharacterized protein.	0.678
RRN3	NTAN1	ENSOCUP00000005795	ENSOCUP00000005789	Uncharacterized protein.	N-terminal asparagine amidase.	0.739