STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU4F1POU domain protein. (339 aa)    
Predicted Functional Partners:
ISL1
ISL LIM homeobox 1.
   
 
 0.708
LHX1
LIM homeobox 1.
   
 
 0.640
VSX2
Visual system homeobox 2.
   
  
 0.633
ATOH7
Atonal bHLH transcription factor 7.
      
 0.620
NEUROG2
Neurogenin 2.
   
  
 0.616
ISL2
ISL LIM homeobox 2.
   
 
 0.579
PAX6
Uncharacterized protein.
   
 
 0.562
TLX3
T cell leukemia homeobox 3.
   
  
 0.558
PRDM12
PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily.
   
 
 0.547
PRDM13
PR/SET domain 13.
   
  
 0.534
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.