STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNTD1Lamin tail domain containing 1. (415 aa)    
Predicted Functional Partners:
LRRC18
Leucine rich repeat containing 18.
   
  
 0.776
ATP6AP1L
Uncharacterized protein.
    
 
 0.744
DTHD1
Death domain containing 1.
      
 0.742
BANF1
Uncharacterized protein.
   
 0.728
ENSOCUP00000048359
Uncharacterized protein.
   
 0.728
LEMD3
LEM domain containing 3.
   
 0.711
EMD
Emerin (Predicted).
    
 0.700
CCDC62
Coiled-coil domain containing 62.
      
 0.697
BANF2
Barrier to autointegration factor 2.
   
 0.618
FBXO7
F-box domain-containing protein.
   
 
 0.616
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.