Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRPK2SRSF protein kinase 2. (739 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1.
   
  0.967
SRSF5
Serine and arginine rich splicing factor 5.
    
 0.957
SRSF1
Uncharacterized protein.
    
 0.945
SRSF6
Serine/arginine-rich-splicing factor 6.
    
 0.944
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.939
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.938
PRPF38A
Pre-mRNA processing factor 38A.
    
 
 0.927
DDX46
DEAD-box helicase 46.
   
 
 0.924
SRSF9
Serine and arginine rich splicing factor 9.
    
 0.902
G1T068_RABIT
Uncharacterized protein.
    
 0.889
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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