Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MESTMesoderm specific transcript. (335 aa)    
Predicted Functional Partners:
GRB10
Growth factor receptor bound protein 10.
      
 0.735
PLAGL1
PLAG1 like zinc finger 1.
   
 
 0.709
SNRPN
Small nuclear ribonucleoprotein-associated protein.
      
 0.708
PEG3
Paternally expressed 3.
   
 
 0.684
NNAT
Uncharacterized protein.
   
  
 0.657
SGCE
Sarcoglycan epsilon.
      
 0.654
DLK1
Delta like non-canonical Notch ligand 1.
    
 
 0.608
ZFP57
ZFP57 zinc finger protein.
   
 
 0.587
IGF2R
Insulin like growth factor 2 receptor.
      
 0.576
DIRAS3
Uncharacterized protein.
    
 
 0.568
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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