STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGR2Uncharacterized protein. (351 aa)    
Predicted Functional Partners:
ATG16L2
Autophagy related 16 like 2.
      
 0.707
GPRASP1
G protein-coupled receptor associated sorting protein 1.
   
  
 0.674
TENT5D
Terminal nucleotidyltransferase 5D.
      
 0.636
MYOZ1
Uncharacterized protein.
      
 0.628
SLC25A14
Solute carrier family 25 member 14; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.624
METAP1D
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
  
  
 0.560
FKBP14
Peptidylprolyl isomerase.
   
  
 0.549
ZNF394
Zinc finger protein 394.
   
  
 0.540
QRFPR
Pyroglutamylated RFamide peptide receptor; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.528
ZNF483-2
Uncharacterized protein.
      
 0.528
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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