Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD3E | ENSOCUP00000033540 | ENSOCUP00000019523 | ENSOCUP00000033540 | T-cell surface glycoprotein CD3 epsilon chain; Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR- mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation o [...] | Ig-like domain-containing protein. | 0.901 |
CD3E | PGBD5 | ENSOCUP00000019523 | ENSOCUP00000005918 | T-cell surface glycoprotein CD3 epsilon chain; Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR- mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation o [...] | PiggyBac transposable element derived 5. | 0.664 |
ENSOCUP00000033540 | CD3E | ENSOCUP00000033540 | ENSOCUP00000019523 | Ig-like domain-containing protein. | T-cell surface glycoprotein CD3 epsilon chain; Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR- mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation o [...] | 0.901 |
ENSOCUP00000033540 | PGBD5 | ENSOCUP00000033540 | ENSOCUP00000005918 | Ig-like domain-containing protein. | PiggyBac transposable element derived 5. | 0.664 |
JRKL | PGBD5 | ENSOCUP00000017182 | ENSOCUP00000005918 | JRK like. | PiggyBac transposable element derived 5. | 0.694 |
JRKL | THAP9 | ENSOCUP00000017182 | ENSOCUP00000000294 | JRK like. | THAP domain containing 9. | 0.697 |
PGBD1 | PGBD5 | ENSOCUP00000015440 | ENSOCUP00000005918 | PiggyBac transposable element derived 1. | PiggyBac transposable element derived 5. | 0.940 |
PGBD1 | THAP9 | ENSOCUP00000015440 | ENSOCUP00000000294 | PiggyBac transposable element derived 1. | THAP domain containing 9. | 0.729 |
PGBD5 | CD3E | ENSOCUP00000005918 | ENSOCUP00000019523 | PiggyBac transposable element derived 5. | T-cell surface glycoprotein CD3 epsilon chain; Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR- mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation o [...] | 0.664 |
PGBD5 | ENSOCUP00000033540 | ENSOCUP00000005918 | ENSOCUP00000033540 | PiggyBac transposable element derived 5. | Ig-like domain-containing protein. | 0.664 |
PGBD5 | JRKL | ENSOCUP00000005918 | ENSOCUP00000017182 | PiggyBac transposable element derived 5. | JRK like. | 0.694 |
PGBD5 | PGBD1 | ENSOCUP00000005918 | ENSOCUP00000015440 | PiggyBac transposable element derived 5. | PiggyBac transposable element derived 1. | 0.940 |
PGBD5 | QRICH1 | ENSOCUP00000005918 | ENSOCUP00000015225 | PiggyBac transposable element derived 5. | Glutamine rich 1. | 0.616 |
PGBD5 | THAP9 | ENSOCUP00000005918 | ENSOCUP00000000294 | PiggyBac transposable element derived 5. | THAP domain containing 9. | 0.905 |
PGBD5 | TMEM145 | ENSOCUP00000005918 | ENSOCUP00000033535 | PiggyBac transposable element derived 5. | Transmembrane protein 145. | 0.789 |
PGBD5 | XKR7 | ENSOCUP00000005918 | ENSOCUP00000024323 | PiggyBac transposable element derived 5. | XK-related protein. | 0.847 |
PGBD5 | ZMYM2 | ENSOCUP00000005918 | ENSOCUP00000014688 | PiggyBac transposable element derived 5. | Zinc finger MYM-type containing 2. | 0.648 |
PGBD5 | ZMYM3 | ENSOCUP00000005918 | ENSOCUP00000020325 | PiggyBac transposable element derived 5. | Zinc finger MYM-type containing 3. | 0.653 |
QRICH1 | PGBD5 | ENSOCUP00000015225 | ENSOCUP00000005918 | Glutamine rich 1. | PiggyBac transposable element derived 5. | 0.616 |
THAP9 | JRKL | ENSOCUP00000000294 | ENSOCUP00000017182 | THAP domain containing 9. | JRK like. | 0.697 |
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