STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP42Rho GTPase activating protein 42. (874 aa)    
Predicted Functional Partners:
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
      
 0.720
ARHGEF37
Rho guanine nucleotide exchange factor 37.
      
 0.705
ARHGEF40
Rho guanine nucleotide exchange factor 40.
      
 0.699
ARHGEF38
Rho guanine nucleotide exchange factor 38.
      
 0.640
FCHSD1
FCH and double SH3 domains 1.
    
 0.636
FCHSD2
FCH and double SH3 domains 2.
    
 0.626
MTSS2
MTSS I-BAR domain containing 2.
      
 0.623
SLITRK4
SLIT and NTRK like family member 4.
      
 0.567
SNIP1
Smad nuclear interacting protein 1.
      
 0.559
DNMBP
Dynamin binding protein.
      
 0.547
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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