STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRF1Perforin 1. (583 aa)    
Predicted Functional Partners:
LOC100346285
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.920
LOC100346200
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.919
G1TX71_RABIT
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.894
FASLG
Fas ligand; Belongs to the tumor necrosis factor family.
   
 0.853
CD8A
Ig-like domain-containing protein.
   
  
 0.841
NKG7
Natural killer cell granule protein 7.
   
  
 0.798
KLRD1
Killer cell lectin like receptor D1.
   
 0.774
LOC103351183
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.766
IFNG
Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family.
   
  
 0.755
GZMH
Granzyme H; Belongs to the peptidase S1 family.
   
 0.754
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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