Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG12 | ATG14 | ENSOCUP00000037928 | ENSOCUP00000046270 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy related 14. | 0.953 |
ATG12 | ATG3 | ENSOCUP00000037928 | ENSOCUP00000013444 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy-related protein 3. | 0.999 |
ATG12 | ATG4A | ENSOCUP00000037928 | ENSOCUP00000034020 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.889 |
ATG12 | ATG4B | ENSOCUP00000037928 | ENSOCUP00000022235 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.936 |
ATG12 | ATG7 | ENSOCUP00000037928 | ENSOCUP00000033142 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] | 0.999 |
ATG12 | BECN1 | ENSOCUP00000037928 | ENSOCUP00000013727 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Uncharacterized protein. | 0.976 |
ATG12 | BNIP3 | ENSOCUP00000037928 | ENSOCUP00000002192 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | BCL2 interacting protein 3. | 0.727 |
ATG12 | GABARAP | ENSOCUP00000037928 | ENSOCUP00000006049 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Gamma-aminobutyric acid receptor-associated protein; Ubiquitin-like modifier that plays a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis. Involved in autophagy. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity); Belongs to the ATG8 family. | 0.990 |
ATG12 | NBR1 | ENSOCUP00000037928 | ENSOCUP00000022089 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | NBR1 autophagy cargo receptor. | 0.949 |
ATG12 | SQSTM1 | ENSOCUP00000037928 | ENSOCUP00000013263 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Sequestosome 1. | 0.930 |
ATG14 | ATG12 | ENSOCUP00000046270 | ENSOCUP00000037928 | Autophagy related 14. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.953 |
ATG14 | ATG3 | ENSOCUP00000046270 | ENSOCUP00000013444 | Autophagy related 14. | Autophagy-related protein 3. | 0.915 |
ATG14 | ATG4A | ENSOCUP00000046270 | ENSOCUP00000034020 | Autophagy related 14. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.725 |
ATG14 | ATG4B | ENSOCUP00000046270 | ENSOCUP00000022235 | Autophagy related 14. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. | 0.817 |
ATG14 | ATG7 | ENSOCUP00000046270 | ENSOCUP00000033142 | Autophagy related 14. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] | 0.919 |
ATG14 | BECN1 | ENSOCUP00000046270 | ENSOCUP00000013727 | Autophagy related 14. | Uncharacterized protein. | 0.999 |
ATG14 | BNIP3 | ENSOCUP00000046270 | ENSOCUP00000002192 | Autophagy related 14. | BCL2 interacting protein 3. | 0.611 |
ATG14 | GABARAP | ENSOCUP00000046270 | ENSOCUP00000006049 | Autophagy related 14. | Gamma-aminobutyric acid receptor-associated protein; Ubiquitin-like modifier that plays a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis. Involved in autophagy. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation (By similarity); Belongs to the ATG8 family. | 0.991 |
ATG14 | NBR1 | ENSOCUP00000046270 | ENSOCUP00000022089 | Autophagy related 14. | NBR1 autophagy cargo receptor. | 0.669 |
ATG14 | SQSTM1 | ENSOCUP00000046270 | ENSOCUP00000013263 | Autophagy related 14. | Sequestosome 1. | 0.740 |
page 1 of 6