STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF6PHD finger protein 6. (366 aa)    
Predicted Functional Partners:
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.841
KDM6A
Lysine demethylase 6A.
   
 0.772
SETBP1
SET binding protein 1.
   
 
 0.740
ASXL1
ASXL transcriptional regulator 1.
    
 0.731
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
    
 
 0.720
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.709
CREBBP
CREB binding protein.
   
 0.701
PHF13
PHD finger protein 13.
   
 0.669
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.665
EP300
E1A binding protein p300.
   
 0.664
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.