STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF20PHD finger protein 20 (Predicted). (1009 aa)    
Predicted Functional Partners:
KANSL1
KAT8 regulatory NSL complex subunit 1.
    
 0.987
MCRS1
Microspherule protein 1.
   
 0.987
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.983
KANSL3
KAT8 regulatory NSL complex subunit 3.
   
 0.965
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.936
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit; Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue. Acts on cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, EZH2, PFKL, KMT2E/MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Probably by glycosyla [...]
   
 0.869
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
   
 
 0.841
ING1
Inhibitor of growth protein.
   
 
 0.834
WDR5B
WD repeat domain 5B.
    
 0.808
KANSL1L
KAT8 regulatory NSL complex subunit 1 like.
  
 
 0.783
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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