STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La ribonucleoprotein domain family member 7. (579 aa)    
Predicted Functional Partners:
MEPCE
Methylphosphate capping enzyme.
    
 0.999
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.997
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.982
CCNT2
Cyclin T2.
   
 0.801
AFF4
Uncharacterized protein RA_m002_jsmFBA6Br.
   
 0.797
DDX21
DExD-box helicase 21.
   
 0.777
ELL2
Elongation factor for RNA polymerase II 2.
     
 0.756
AFF1
AF4/FMR2 family member 1.
    
 0.752
LARP4B
HTH La-type RNA-binding domain-containing protein.
      
 0.715
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 0.706
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.