STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1SSC0_RABITProtein kinase domain-containing protein. (98 aa)    
Predicted Functional Partners:
PARD6A
Par-6 family cell polarity regulator alpha.
    
 0.833
PARD6B
Par-6 family cell polarity regulator beta.
    
 0.833
PDPK1
3-phosphoinositide dependent protein kinase 1; Belongs to the protein kinase superfamily.
    
0.662
NBR1
NBR1 autophagy cargo receptor.
    
 0.634
SQSTM1
Sequestosome 1.
    
 0.627
GSAP
Gamma-secretase activating protein.
    
 0.627
ITSN2
Intersectin 2.
   
 0.577
NUMBL
NUMB like endocytic adaptor protein.
    
 
 0.534
NUMB
NUMB endocytic adaptor protein.
    
 
 0.534
STXBP6
Syntaxin binding protein 6.
    
 
 0.530
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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