Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G1SSE9_RABITUncharacterized protein. (296 aa)    
Predicted Functional Partners:
TBX6
T-box transcription factor 6.
     
 0.794
TLE1
Uncharacterized protein.
    
 
 0.786
TLE3
TLE family member 3, transcriptional corepressor.
    
 
 0.780
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.742
PBX2
PBX homeobox 2.
    
 
 0.650
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.463
ENSOCUP00000049611
TLE_N domain-containing protein.
    
 
 0.439
MSGN1
Mesogenin 1.
     
 0.408
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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