TREML2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TREML2

Triggering receptor expressed on myeloid cells like 2. (317 aa)

Predicted Functional Partners:

LOC100348748

0.869

TYROBP

0.751

CASS4

0.728

INPP5D

0.704

PRSS36

0.662

LOC100349504

0.654

PTK2B

0.653

TREML1

0.651

DEF8

0.631

G1T749_RABIT

0.589

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASS4	INPP5D	ENSOCUP00000015380	ENSOCUP00000035979	Cas scaffold protein family member 4.	Inositol polyphosphate-5-phosphatase D.	0.783
CASS4	LOC100348748	ENSOCUP00000015380	ENSOCUP00000041613	Cas scaffold protein family member 4.	IGv domain-containing protein.	0.484
CASS4	PTK2B	ENSOCUP00000015380	ENSOCUP00000018603	Cas scaffold protein family member 4.	Protein tyrosine kinase 2 beta; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.870
CASS4	TREML2	ENSOCUP00000015380	ENSOCUP00000006282	Cas scaffold protein family member 4.	Triggering receptor expressed on myeloid cells like 2.	0.728
DEF8	INPP5D	ENSOCUP00000002160	ENSOCUP00000035979	Differentially expressed in FDCP 8 homolog.	Inositol polyphosphate-5-phosphatase D.	0.467
DEF8	PRSS36	ENSOCUP00000002160	ENSOCUP00000001992	Differentially expressed in FDCP 8 homolog.	Polyserase-2; Serine protease. Has a preference for substrates with an Arg instead of a Lys residue in position P1. Belongs to the peptidase S1 family.	0.810
DEF8	TREML2	ENSOCUP00000002160	ENSOCUP00000006282	Differentially expressed in FDCP 8 homolog.	Triggering receptor expressed on myeloid cells like 2.	0.631
G1T749_RABIT	LOC100348748	ENSOCUP00000012295	ENSOCUP00000041613	IGv domain-containing protein.	IGv domain-containing protein.	0.438
G1T749_RABIT	TREML2	ENSOCUP00000012295	ENSOCUP00000006282	IGv domain-containing protein.	Triggering receptor expressed on myeloid cells like 2.	0.589
G1T749_RABIT	TYROBP	ENSOCUP00000012295	ENSOCUP00000022343	IGv domain-containing protein.	TYRO protein tyrosine kinase binding protein.	0.449
INPP5D	CASS4	ENSOCUP00000035979	ENSOCUP00000015380	Inositol polyphosphate-5-phosphatase D.	Cas scaffold protein family member 4.	0.783
INPP5D	DEF8	ENSOCUP00000035979	ENSOCUP00000002160	Inositol polyphosphate-5-phosphatase D.	Differentially expressed in FDCP 8 homolog.	0.467
INPP5D	LOC100348748	ENSOCUP00000035979	ENSOCUP00000041613	Inositol polyphosphate-5-phosphatase D.	IGv domain-containing protein.	0.651
INPP5D	PRSS36	ENSOCUP00000035979	ENSOCUP00000001992	Inositol polyphosphate-5-phosphatase D.	Polyserase-2; Serine protease. Has a preference for substrates with an Arg instead of a Lys residue in position P1. Belongs to the peptidase S1 family.	0.545
INPP5D	PTK2B	ENSOCUP00000035979	ENSOCUP00000018603	Inositol polyphosphate-5-phosphatase D.	Protein tyrosine kinase 2 beta; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.602
INPP5D	TREML2	ENSOCUP00000035979	ENSOCUP00000006282	Inositol polyphosphate-5-phosphatase D.	Triggering receptor expressed on myeloid cells like 2.	0.704
INPP5D	TYROBP	ENSOCUP00000035979	ENSOCUP00000022343	Inositol polyphosphate-5-phosphatase D.	TYRO protein tyrosine kinase binding protein.	0.595
LOC100348748	CASS4	ENSOCUP00000041613	ENSOCUP00000015380	IGv domain-containing protein.	Cas scaffold protein family member 4.	0.484
LOC100348748	G1T749_RABIT	ENSOCUP00000041613	ENSOCUP00000012295	IGv domain-containing protein.	IGv domain-containing protein.	0.438
LOC100348748	INPP5D	ENSOCUP00000041613	ENSOCUP00000035979	IGv domain-containing protein.	Inositol polyphosphate-5-phosphatase D.	0.651