STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUFIP1Nuclear FMR1 interacting protein 1. (494 aa)    
Predicted Functional Partners:
ZNHIT6
Zinc finger HIT-type containing 6.
   
 0.886
ZNHIT3
Uncharacterized protein.
    
 
 0.858
PIH1D1
PIH1 domain containing 1.
    
 0.834
RPAP3
RNA polymerase II associated protein 3.
   
 0.725
C12orf45
Chromosome 12 open reading frame 45.
   
 0.724
NOP56
NOP56 ribonucleoprotein.
   
 0.640
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.569
ZNHIT1
Zinc finger HIT-type containing 1.
      
 0.567
RRAGA
Ras related GTP binding A.
   
 0.560
SDAD1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
      
 0.536
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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