STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN7Calpain 7; Belongs to the peptidase C2 family. (813 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1; Regulatory subunit of the calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.
   
 0.853
CAST
Erythrocyte calpastatin; Specific inhibition of calpain (calcium-dependent cysteine protease). Plays a key role in postmortem tenderization of meat and have been proposed to be involved in muscle protein degradation in living tissue.
   
 0.768
PDCD7
Programmed cell death 7.
   
  
 0.652
MROH7
Uncharacterized protein.
      
 0.649
CDC42BPG
Uncharacterized protein.
   
 
 0.617
UBQLNL
Ubiquilin-like protein (Predicted).
   
 
 0.616
TFAP2A
Transcription factor AP-2 alpha.
      
 0.578
ITSN2
Intersectin 2.
   
 
  0.540
MMP28
Matrix metallopeptidase 28.
      
 0.531
LRGUK
Guanylate kinase-like domain-containing protein.
   
 
 0.507
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (58%) [HD]