STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX15MIT domain-containing protein. (383 aa)    
Predicted Functional Partners:
RINT1
RAD50 interactor 1.
   
 0.977
STX18
Syntaxin 18.
   
 0.970
NBAS
Neuroblastoma amplified sequence.
   
 0.968
ZW10
Zw10 kinetochore protein.
   
 0.967
TMEM63C
Transmembrane protein 63C.
      
 0.739
RNF150
Ring finger protein 150.
   
  
 0.738
TMEM100
Transmembrane protein 100.
      
 0.736
SNX17
Sorting nexin 17.
   
 
 0.707
SNX12
Sorting nexin 12.
   
  
 0.702
PXMP2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.698
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.