STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNT1Cyclin T1; Belongs to the cyclin family. (1010 aa)    
Predicted Functional Partners:
AFF4
Uncharacterized protein RA_m002_jsmFBA6Br.
   
 0.999
AFF1
AF4/FMR2 family member 1.
   
 0.990
LARP7
La ribonucleoprotein domain family member 7.
   
 0.982
CCNH
Cyclin H; Belongs to the cyclin family.
   
 
 0.974
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
   
 
 0.959
HEXIM2
HEXIM P-TEFb complex subunit 2.
   
 
 0.956
MEPCE
Methylphosphate capping enzyme.
   
 
 0.944
ELL2
Elongation factor for RNA polymerase II 2.
    
 0.938
ELL3
Uncharacterized protein.
    
 0.927
CDK12
Cyclin dependent kinase 12.
   
 0.917
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.