STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGLYRP1Peptidoglycan-recognition protein; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Involved in innate immunity. (197 aa)    
Predicted Functional Partners:
LOC100349504
Uncharacterized protein.
   
  
 0.760
HSPA4
Heat shock protein family A (Hsp70) member 4.
   
  
 0.613
TINAG
SMB domain-containing protein; Belongs to the peptidase C1 family.
   
  
 0.603
NOD2
Nucleotide oligomerization domain 2 protein.
   
  
 0.531
LTF
Lactotransferrin; Belongs to the transferrin family.
   
  
 0.521
NOD1
Nucleotide binding oligomerization domain containing 1.
   
  
 0.515
TLR4
TIR domain-containing protein; Belongs to the Toll-like receptor family.
   
  
 0.505
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
   
  
 0.497
TNFRSF1A
TNF receptor superfamily member 1A.
      
 0.475
TICAM2
TIR domain-containing protein.
      
 0.465
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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