STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOD3Extracellular superoxide dismutase [Cu-Zn]; Protect the extracellular space from toxic effect of reactive oxygen intermediates by converting superoxide radicals into hydrogen peroxide and oxygen; Belongs to the Cu-Zn superoxide dismutase family. (393 aa)    
Predicted Functional Partners:
CCS
Copper chaperone for superoxide dismutase.
   
 0.968
PARK7
Parkinsonism associated deglycase.
  
 0.947
CAT
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
  
 0.926
ATOX1
Antioxidant 1 copper chaperone.
    
 0.836
GPX1
Glutathione peroxidase 1; Protects the hemoglobin in erythrocytes from oxidative breakdown.
   
 0.793
GPX8
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.786
GPX7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.785
GPX2
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.759
GPX3
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.758
GPX6
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.739
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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