STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member. (725 aa)    
Predicted Functional Partners:
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.828
SLC16A10
Solute carrier family 16 member 10.
   
 
 0.778
FADS6
Fatty acid desaturase 6.
      
 0.692
LIX1
Uncharacterized protein.
   
  
 0.530
SLC10A6
Solute carrier family 10 member 6.
   
  
 0.527
ABCC11
ATP binding cassette subfamily C member 11.
      
 0.507
SLC7A1
Solute carrier family 7 member 1.
   
  
 0.478
ATP1A2
Sodium/potassium-transporting ATPase subunit alpha.
   
  
 0.446
UPRT
Uracil phosphoribosyltransferase homolog.
      
 0.444
MFSD2A
Major facilitator superfamily domain containing 2A.
   
  
 0.429
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.