STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNASE1Ribonuclease A family member 1, pancreatic; Belongs to the pancreatic ribonuclease family. (147 aa)    
Predicted Functional Partners:
SYCN
Uncharacterized protein.
   
  
 0.579
NLRP14
NLR family pyrin domain containing 14.
   
 
 0.569
NLRP12
NLR family pyrin domain containing 12.
    
 
 0.567
LOC100358819
NACHT domain-containing protein.
    
 
 0.567
NLRP2
NLRC4_HD2 domain-containing protein.
    
 
 0.567
ENSOCUP00000037212
Pyrin domain-containing protein.
    
 
 0.567
ENSOCUP00000038449
Uncharacterized protein.
    
 
 0.567
NLRP10
NLR family pyrin domain containing 10.
    
 
 0.567
BGN
Biglycan; May be involved in collagen fiber assembly.
      
 0.566
BDNF
Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS.
      
 0.559
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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