STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF11Ring finger protein 11. (154 aa)    
Predicted Functional Partners:
TAX1BP1
Tax1 binding protein 1.
   
 
 0.967
ITCH
E3 ubiquitin-protein ligase.
    
 0.889
SMURF2
E3 ubiquitin-protein ligase.
    
 0.871
WWP1
E3 ubiquitin-protein ligase.
    
 0.816
TNFAIP3
TNF alpha induced protein 3.
   
 
 0.784
LOC100343655
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.652
G1U317_RABIT
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.652
ENSOCUP00000046087
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.652
G1TZG8_RABIT
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.642
ENSOCUP00000044175
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.642
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (42%) [HD]